PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr03006.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

GATA

Protein Properties

Length: 127aa MW: 13439.4 Da PI: 9.7694

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr03006.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	56.3	4.4e-18	64	96	1	33
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 C C t+TplWR+gpdg+ktLCnaCG+++rk+ Dr03006.1 64 CMFCSDTSTPLWRNGPDGPKTLCNACGIRHRKE 96 889****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence
MGDHHDLGLA LWARSGGASS SVTKKALVER DLLGLMEETN YQNSGVDVAL TLGVSDPSPG 60 IKKCMFCSDT STPLWRNGPD GPKTLCNACG IRHRKEVNKI ITDLTLGPTP PPQRASGGGG 120 KVARKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18380.1	1e-14	GATA family protein

Link Out ? help Back to Top
Ensembl	Dr03006.1