PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr03084.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NF-YB

Protein Properties

Length: 252aa MW: 26702.3 Da PI: 5.0628

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr03084.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	174.6	9.9e-55	70	166	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 vreqdrf+Pianv+rim+kvlP++akis++aket+qecvse+isf+tsea+d+cqre+rkti+++d++wa+++lGf+dy+epl+vyl+kyreleg++ Dr03084.1 70 VREQDRFMPIANVIRIMRKVLPTHAKISDEAKETIQECVSEYISFITSEANDRCQREQRKTITAEDIIWAMSKLGFDDYIEPLSVYLQKYRELEGDH 166 69********************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MDSAALFQGF QRISRSKSDV GTLSPVSITT NTPANPNGSL DHSPSLTDTN PNPNSTFSGD 60 ANNNNNNCMV REQDRFMPIA NVIRIMRKVL PTHAKISDEA KETIQECVSE YISFITSEAN 120 DRCQREQRKT ITAEDIIWAM SKLGFDDYIE PLSVYLQKYR ELEGDHRGAV RGDALPLKRS 180 QSDVGGGGGV YGAPPPYSLG QGYHGYGGGY YMGVYGDGSG GSSPQSGGGG GCSGAMGGGG 240 GGGGYDPYGP YN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.1	1e-62	NF-YB family protein

Link Out ? help Back to Top
Ensembl	Dr03084.1