PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr03109.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 225aa MW: 25610 Da PI: 10.4197

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr03109.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.2	2.5e-31	142	199	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 +D ++WrKYGqK++kgs++pr+YYrC+s gCp++k+ver+ ++p+++ itYegeHnh Dr03109.1 142 SDHFSWRKYGQKPIKGSPYPRGYYRCSSMsGCPARKHVERAVDEPEMLMITYEGEHNH 199 69**********************9988************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MRKRASETAM EAVAVAGVLS LKKLITMLTS KQSKHKASLE KEKEKMMDLD TQAMANKAMS 60 EFHKLINLLG QTCSGHARFR RAPFMFKSSL SCSNMVYAPQ PLQCLPPRAL DNGFVKRRKG 120 KGRMRRMVRV PAVNMKMVNV PSDHFSWRKY GQKPIKGSPY PRGYYRCSSM SGCPARKHVE 180 RAVDEPEMLM ITYEGEHNHV HLPNINVAHE ELCPHDEDQL VLGLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	1e-36	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr03109.1