PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03264.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 139aa    MW: 15928 Da    PI: 6.535
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03264.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-18652252
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkk 52
               +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aaka+++a++ 
  Dr03264.1  6 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAAKAYDEAARL 52
               69******9.**********8.....334*********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MPKVQRYRGV RQRHWGSWVS EIRHPLLKTR IWLGTFETAE DAAKAYDEAA RLICGTRART  60
NFPYDPNGSG RSSTLSTGLM EKLEKYCGVM KEESKKSRTE IVGKEEINYL NDEFIEEMIE  120
ELIYYGSMEL SSSSSSSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-34ERF family protein