PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr03378.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

ARR-B

Protein Properties

Length: 709aa MW: 77394.4 Da PI: 5.825

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr03378.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	59.3	8e-19	216	259	1	45
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 kpr++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+ Lt+e+ Dr03378.1 216 KPRVVWSVELHRKFVAAVNQL-GIEKAVPKRILDLMNVERLTREN 259 79*****************.******************987 PP
2	Myb_DNA-binding	23.3	1.5e-07	218	257	1	37
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtl 37 r W+ e++ ++v av+qlG + +k+I m+ +++t+ Dr03378.1 218 RVVWSVELHRKFVAAVNQLGIEkaVPKRILDLMNvERLTR 257 678*******************************977777 PP
3	Response_reg	71.4	3.7e-24	27	135	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ ++ l+ +l++ +y +v+ + ++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+ +a+ge + + + + Ga Dr03378.1 27 VLAVDDDPTCLKMLEGLLRRCQY-HVTITGQAVMALKLLRENKdkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMXSANGETSAVMKGITHGAC 121 799******************.***********888888***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ eel + Dr03378.1 122 DYLLKPVRLEELKN 135 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
MTVEERKGGN MARELAQRDQ FPVGMRVLAV DDDPTCLKML EGLLRRCQYH VTITGQAVMA 60 LKLLRENKDK FDLVISDVHM PDMDGFKLLE LVGLEMDLPV IMXSANGETS AVMKGITHGA 120 CDYLLKPVRL EELKNIWQHV VRRRKIDPKD HTGFDNADDC EKNSVANAES GQCAVSSGSS 180 DRNGRINRKR KDQSEDDEDD LDENGNENED PSSQKKPRVV WSVELHRKFV AAVNQLGIEK 240 AVPKRILDLM NVERLTRENK YRLYLKRLSA VASQQANMVA ALGGRDPSYL PMGSLNGFGN 300 YHALVGSGQL PGLTTFQPNG ILNRPNYTTG FGLRNLAPSG MVQFSRTQSD VSSSLTDLGK 360 IQCVNLPGNP HGNVLQGMPA SLGLDQLQQH KVSQDANKCI SGGFSGTGLP GVNSTNSFIT 420 VSNAPLLLQX QQQHAQSSAV SNQFSINVPS LSSDLFDTTV GSSHLCDISR CNDTWQDAVP 480 LTRHPNNSSS VVAPFSNGGL TQNTMAENVT SMVSHMDGNH HDASSSGVTA VPLHDSLVGT 540 DMQFQASTLG GNMMITSAGS LEDSKYLNFR SLSKPKQEYE XQNLDHTHKL NLLAGSPLSS 600 SLQNPSVISL PENQNLNNEL CGAKTKMSMI DQTNPGALFF PQNRISKPAA DVLLKEEYIS 660 DFSGLQGGFS TKDCILDDIV NAAMKPDRDD FALIDGTMRC EMFSLDACF

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

MTVEERKGGN MARELAQRDQ FPVGMRVLAV DDDPTCLKML EGLLRRCQYH VTITGQAVMA  60
LKLLRENKDK FDLVISDVHM PDMDGFKLLE LVGLEMDLPV IMXSANGETS AVMKGITHGA  120
CDYLLKPVRL EELKNIWQHV VRRRKIDPKD HTGFDNADDC EKNSVANAES GQCAVSSGSS  180
DRNGRINRKR KDQSEDDEDD LDENGNENED PSSQKKPRVV WSVELHRKFV AAVNQLGIEK  240
AVPKRILDLM NVERLTRENK YRLYLKRLSA VASQQANMVA ALGGRDPSYL PMGSLNGFGN  300
YHALVGSGQL PGLTTFQPNG ILNRPNYTTG FGLRNLAPSG MVQFSRTQSD VSSSLTDLGK  360
IQCVNLPGNP HGNVLQGMPA SLGLDQLQQH KVSQDANKCI SGGFSGTGLP GVNSTNSFIT  420
VSNAPLLLQX QQQHAQSSAV SNQFSINVPS LSSDLFDTTV GSSHLCDISR CNDTWQDAVP  480
LTRHPNNSSS VVAPFSNGGL TQNTMAENVT SMVSHMDGNH HDASSSGVTA VPLHDSLVGT  540
DMQFQASTLG GNMMITSAGS LEDSKYLNFR SLSKPKQEYE XQNLDHTHKL NLLAGSPLSS  600
SLQNPSVISL PENQNLNNEL CGAKTKMSMI DQTNPGALFF PQNRISKPAA DVLLKEEYIS  660
DFSGLQGGFS TKDCILDDIV NAAMKPDRDD FALIDGTMRC EMFSLDACF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-127	ARR-B family protein

Link Out ? help Back to Top
Ensembl	Dr03378.1