PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03411.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 240aa    MW: 27115.7 Da    PI: 5.1817
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03411.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.63.5e-1654100455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Dr03411.1  54 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 100
                6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MPLSSLYSID SSLDFDGWCD YDCESEGGAE FSEEPVKLEN SRSSGLKRSR AAEVHNLSEK  60
RRRSRINEKM KALQNLIPNS NKTDKASMLD EAIEYLKQLQ LQVQILSMRN GLSLHPMYLP  120
ENLQLMQQPS QMGMGFAVNG ARSEANMSVA DMLQQHCSHT LNQSELCYQP PIAPNATNIN  180
NLTCTFHESF QLPIAEELKE EPEVRQQSKA AKKLTRNLAS DKQIVMESTE PMGTTRIYIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.13e-40bHLH family protein