PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03517.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 296aa    MW: 33308.7 Da    PI: 6.8518
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03517.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-1852102155
        AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +++ GVr+++ +grWvAeI+d      k+ r +lg+f taeeAaka+++a+  l+g
  Dr03517.1  52 KKFVGVRQRP-SGRWVAEIKDtT----KKIRMWLGTFETAEEAAKAYDEAAFLLRG 102
                589*******.7*********33....36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MELHFQHSSQ LSKTSKFKPR NKTTTCTTNT TKNNTKNNNN NNNNNKSKKN NKKFVGVRQR  60
PSGRWVAEIK DTTKKIRMWL GTFETAEEAA KAYDEAAFLL RGSNTRTNFI THSCSNSLLA  120
SRIHNLLHLK KLNNIDTNSS NNTPPSQTTT TTTITTTTTT TTTTTTTTTT SSSSSENASP  180
LEEVMGKEES VMMNGNEDVY RPSFENIGEE FYVEVGSSSC SVFDHDHEFE LDIKSGDALC  240
ELSEFDRMKV ERQISASLYA MNGVHEYLEA VTTDHSSSYD QMWDLPPLCH LFFRSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-23ERF family protein