PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03538.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 259aa    MW: 27794.8 Da    PI: 5.7639
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03538.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.1e-11142189455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    +k   Ka++L + ++YI+ Lq
  Dr03538.1 142 SHSLAERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYIQALQ 189
                8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDPVAMASQG VAGEMWQYGM LGGARIGGRD VASVGDSTVT EQSTGGGGGG RSRRKWTDIT  60
AAGSEGDSSK LVSSSSGNEL ADCEGKRIKI MKSIEDNSNS RSEAEASSGN CNKSVDQNGQ  120
PSEPSKQDYI HVRARRGQAT DSHSLAERAR REKISERMKI LQDLVPGCNK VIGKASVLDE  180
IINYIQALQH QVEFLSMKLE AVTSRVNSGM EGFTLKDFGA QPFGTAPSLA FGSQAREFEQ  240
EPTSEWLHMQ VGGAFERVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.16e-67bHLH family protein