PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03581.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 180aa    MW: 19271.6 Da    PI: 11.9048
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03581.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-2069118255
        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+++eeAa a+++a+++l+g
  Dr03581.1  69 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDSPEEAALAYDHAARALRG 118
                69*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MMAGAAGQKP YGSASVGLTS SSHETPCDTS NQAAALPTLS LFRSFKSSAS SPLXSSSSLV  60
GSSAAMAGHY RGVRKRPWGR YAAEIRDPWK KTRVWLGTFD SPEEAALAYD HAARALRGTK  120
AKTNFPHPRS PLIGSRTRLT PRQRRRTPPL TKRFSPSLSA TPHCSSSPPP STLASIARFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.17e-27ERF family protein