PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03652.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family C2H2
Protein Properties Length: 217aa    MW: 23389 Da    PI: 9.8115
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03652.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00041185206323
                ETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                C++Cg  F+ ++ L+ H  + H
  Dr03652.1 185 CHKCGDLFTKWEALEAHHVSkH 206
                *****************98777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MPTVWVSLRK SLDCKTEPSE VHEPKSRKQQ LSTXLTKKGS RSGCSRSIAN LKDVIHGSRR  60
HLERPSTCSP RSIGSNEFLN PITHEVILSN SKCELKITGF GSYHESHEGG VDVNYVGTLR  120
PGTPGPGGQY NNPIPSRKAH SLVGSSSSLS KAVFGNGAFG VGVHQPHNVI PTAPVPQGPS  180
PVVMCHKCGD LFTKWEALEA HHVSKHAGXN HFTNAIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.15e-43C2H2 family protein