PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03654.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 276aa    MW: 30838.4 Da    PI: 9.698
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03654.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.77.3e-07141183855
                HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                + r RR+ri ++ + L+ l+P+      kK++  ++L +A +Y++ L+
  Dr03654.1 141 IARSRRNRISDRTQILQGLMPWE-----KKMDTGTMLLEAHKYVRFLE 183
                6799******************9.....8***************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MERHLRTRIL VSPSLMAPIA DEGFPTVSMA FNAGDSSCFG YDHGNLPPFP ESLASMDPSP  60
KLKAPKIETM LNEKQRRFHG FTELPDYQSL ESPNLSSVTA ESSHKRYRSP PLAPPFPKTP  120
SEMNFQLNAG LRPSVVPRSD IARSRRNRIS DRTQILQGLM PWEKKMDTGT MLLEAHKYVR  180
FLEAQVTALQ SMPVSSSGFN PSPVPCRAGG LDVLSRQQLL QVMVNSAPVQ DFLYKKGFCV  240
FSAEQLAMLR QVIQRRPQIL LLLDSNSNHS ELSSPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.11e-24bHLH family protein