PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr03739.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

ERF

Protein Properties

Length: 217aa MW: 25122.5 Da PI: 6.8822

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr03739.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	27.2	9.5e-09	11	47	13	47
AP2 13 grWvAeIrdpse.ng.kr.krfslgkfgtaeeAakaai 47 g W+ ++++ +e ++ ++ kr++lg+f+t eeAa a++ Dr03739.1 11 GGWA-RYMEDTEiRNpHTkKRHWLGTFDTXEEAALAYD 47 6666.33333445777445******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MQRLLCREPD GGWARYMEDT EIRNPHTKKR HWLGTFDTXE EAALAYDMSS IIFSGIDRAL 60 TNFSXMFLTM PSPPPPPPPP XPHSEEESDY CXEYNLEISD DHDHLVDEMM IMTMVMMISL 120 TEVLEMMLMM PNLAAMEVVA LLPKENSKAI AIVVVAAVAF PIHREWTKKR ESISPRRCRR 180 SSMVRWAMIG VRKMKALHQK AIMLLVIDKQ LDRRAFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12890.1	9e-14	ERF family protein

Link Out ? help Back to Top
Ensembl	Dr03739.1