PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03786.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 227aa    MW: 25812.1 Da    PI: 4.8204
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03786.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000451742101354
                HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                R+ri +  + Lr+++P      ++  + a++L +A++Y++sL
  Dr03786.1 174 RKRIQETVSMLRRIIPGG----KG-KDTAAVLDEAINYLRSL 210
                8999999999*****997....34.466************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MEGNIDPKNS SWWEYTSLNN GSFNLVMPPM FPSYANAMLG SXEQRNFMVF DHSRDQTSLI  60
YSSVAGTQHP SFHANVVTNV ENGHESEEMH ENTEEIDALL YSESNHIEDH DDDDDDEVMS  120
TGHSPEDLNF DCSSTPTKKR RLDINREFYD TSLLDTASST SSREGLEANK KLKRKRIQET  180
VSMLRRIIPG GKGKDTAAVL DEAINYLRSL KLRFKKPLIE GVXIMHQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138173KKRRLDINREFYDTSLLDTASSTSSREGLEANKKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.11e-08bHLH family protein