PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03815.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 225aa    MW: 26388.3 Da    PI: 4.5569
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03815.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.8e-173072145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ W++eEd+ l++ +++ G++ W+ Ia++++ gRt++++k++w+
        Dr03815.1 30 KDTWSEEEDKTLIQIHREVGNK-WAEIAKKLP-GRTENSIKNHWN 72
                     679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MSMECSLMVD EVHHQPLMAM DELSCITGNK DTWSEEEDKT LIQIHREVGN KWAEIAKKLP  60
GRTENSIKNH WNATKRRLLS RRRLRSSRHQ KSNSLLENYI KSLNLQITPT RRRKNTHNSD  120
NSNPMKPTQS LKDEHEVQHE VWNYEDECFV PNCEFGDLSE LLFDESSPAL MSENYRCEEE  180
EDVGFLFDKL GFGDGEENEG LDMEVVEEME GWDEMQRGFM DESVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.12e-25MYB family protein