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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Dr04032.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 286aa MW: 32776.9 Da PI: 7.0875 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 56 | 6.9e-18 | 92 | 145 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k
Dr04032.1 92 KKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 145
456899***********************************************9 PP
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| 2 | HD-ZIP_I/II | 128.2 | 3.5e-41 | 91 | 181 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkd+ +Lkr++++l++en++L++++++L++e+
Dr04032.1 91 EKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDFGVLKRQFESLRSENDALQAHNKKLQAEI 181
69**************************************************************************************987 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 286 aa Download sequence |
MSLDHQMACN GMSSSFFPPN FILQMQPPTE NEHQHQPLPS TLSPFLPTNT QDLRGMATML 60 SKRSMSFCGR EPCEEMTGDD EFSDDCSHAG EKKRRLNMEQ VRTLEKNFEL GNKLEPERKM 120 QLARALGLQP RQIAIWFQNR RARWKTKQLE KDFGVLKRQF ESLRSENDAL QAHNKKLQAE 180 ILALRGTREA SEPINLNKET EGSCSNRSEN SSDIKLDISR TSAIQHARPL FSAIGRPVGN 240 SRTHELNFPP MKIEHGTPDD NFCNIFCSID DQSAAIWPWS EHHNFH |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 140 | 148 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G69780.1 | 4e-90 | HD-ZIP family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | Dr04032.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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