PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04182.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 209aa    MW: 22208.7 Da    PI: 8.3765
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04182.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.4e-31160159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
               ++Dg++WrKYGqK+ kg+++pr+YYrC+ a +Cpvkk+v+r+ ed +++++tYeg+Hnh+
  Dr04182.1  1 MNDGCQWRKYGQKTAKGNPCPRAYYRCSVAqNCPVKKQVQRCMEDMSILITTYEGNHNHP 60
               58**************************999****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MNDGCQWRKY GQKTAKGNPC PRAYYRCSVA QNCPVKKQVQ RCMEDMSILI TTYEGNHNHP  60
LPFSAATMAS TTSAAASMLM SGSSDSQPQT STTVSAGLHT TTSNTTLLSK ENLITDSIAH  120
AITTDPCFRS ALATAIASYI GVHGAQSRWE SSSAGHGRDQ ERHGAGSVIS SGNNLENLTF  180
SQSLMGFSGA KSASSSPVED RGQYINGMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.13e-40WRKY family protein