PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr04186.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 174aa MW: 19564.1 Da PI: 7.214

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr04186.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	63.5	3.6e-20	99	150	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K vk+s++p s gC+vkk+ver+++dp++v++tYeg Hnh+ Dr04186.1 99 LDDGYKWRKYGKKAVKNSPNP-------SLGCTVKKRVERDRDDPSFVITTYEGVHNHP 150 59*****************.......68**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MTAMLELSEL IMPFYHHSLP SDVHVSPQNP NLASGFPFMN TYNHLASNDA SLLENLDILA 60 EGTGESSGLF RNIQTQRMRL EIGAGRRIGF RTKSEVENLD DGYKWRKYGK KAVKNSPNPS 120 LGCTVKKRVE RDRDDPSFVI TTYEGVHNHP SPSPVSCASP FEHMPAMDPF AWNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	1e-31	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr04186.1