PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04197.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GATA
Protein Properties Length: 202aa    MW: 22965.6 Da    PI: 10.4799
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04197.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.91.6e-19112146135
       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk ++
  Dr04197.1 112 CSDCRTTKTPLWRSGPQGPKSLCNACGIRQRKARK 146
                ********************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MSPCRQRYTS LFAIIQVSLP SLNVILFFFF FFKSSLLFPM TSVYSSEDAE QVEQLMISES  60
SIQHGHDHEH TKWMSSKMRL MKKMMNSNQS TSTSKPRRNN SVPESGDVIR VCSDCRTTKT  120
PLWRSGPQGP KSLCNACGIR QRKARKLQSM AMSSDRGHTV PFKKRFKITT TENSAFHPRL  180
LPQDEKEAAI LLMALSCGLL HS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.14e-21GATA family protein