PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04231.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 200aa    MW: 21835.8 Da    PI: 10.141
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04231.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.6e-14107151347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + + lG+g+W+ I+r++  +Rt+ q+ s+ qky
        Dr04231.1 107 PWTEEEHRSFLAGLEILGKGDWRGISRHFVMTRTPTQVASHAQKY 151
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MKIARKCSHC GNNGHNSRTC RNPISGVNNY GLRLFGVQLH IGSPLKKSFS MDFLPSSSSS  60
HAAASPSSSS SSSSHISVDE AAEKISNGYL SDGLLGKTPE KPKKGVPWTE EEHRSFLAGL  120
EILGKGDWRG ISRHFVMTRT PTQVASHAQK YFLRQNNINK KKRRLSLFDT VGPCASVIEL  180
SLCPLPDLEL SIASSRLLDQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160164KKKRR
2160165KKKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.15e-50MYB_related family protein