PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04238.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family B3
Protein Properties Length: 251aa    MW: 28350.8 Da    PI: 9.6736
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04238.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.11.4e-1718931798
               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                +p +f+++++  +++sk +tl+ +sgr W+ +l   k+s++++l +GW eF++++ L+e +f+vF++dg  +f ++vk+f 
  Dr04238.1 18 GIPVQFLKHIS--TATSKRVTLQGPSGRCWNAEL--GKSSKGTFLCGGWAEFAEDHALREYEFLVFQYDG--DFIFTVKIFG 93
               69*****7776..568899***************..*******************************988..5666999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MVPDPDGEQI PRLVGIRGIP VQFLKHISTA TSKRVTLQGP SGRCWNAELG KSSKGTFLCG  60
GWAEFAEDHA LREYEFLVFQ YDGDFIFTVK IFGNCLERSE TLKDVKIKSE CDDLPIGIIP  120
SPKKVYKRSC FQKRKLVIHE ERSQAPETAN SFTSKFPFAT VKLCRSHITQ PYVMRLPYAF  180
SRTHLPRKKL VLIMKDPNMK SSEVTYIPQK GDADFLSAGW HNFFRGNGLK LVGVLWPKSV  240
DVDAGMLGGY Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.12e-13B3 family protein