PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04297.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 301aa    MW: 33691.8 Da    PI: 6.7983
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04297.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.6e-11134178554
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                h ++Er+RR+++N+ f  L  ++P +      K +Ka+ L  +++Y+k+L
  Dr04297.1 134 HMIAERKRREKLNEQFLSLSAIIPGL-----AKTDKASLLVSTINYLKEL 178
                889**********************7.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MHCEKVEDPK RHEIDRDVRE RVDPAISKTI RRQLDTIRLA TNFLKVENED XYTTKQVSVI  60
AQCAANSPKY LSFGNPDSLS DLQQLYINGI GEEKDEMNFL ISKKPKLMNH DISSFQASGR  120
ASMGNNPHSS SHDHMIAERK RREKLNEQFL SLSAIIPGLA KTDKASLLVS TINYLKELVT  180
KVKSLEZSII DGPVESAXLM KDDKASLITN ESSSSDPLFK IEAKLTGNII VLKFQCKNLK  240
GLAIKALSEI EKLFLTIIDL SIMPFSSSSL DVVVMAKVED GFSLTVKELV EKLSSFFSQF  300
I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138143ERKRRE
2139144RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.15e-32bHLH family protein