PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr04588.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 493aa MW: 56033.5 Da PI: 7.4076

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr04588.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.2	1.4e-52	10	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi++vd++k+ePwdL+ k ++ + ++e+yfFs++dkky+tg+r+nrat++g+Wkatg+dk+++ +++ Dr04588.1 10 VPPGFRFHPTDEELLYYYLRKKVAYEAIDL-DVIRDVDLNKLEPWDLKdKcRIGSgPQNEYYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIHLSNS 108 69**************************.9***********94344444245599*********************************** PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfy+grap+g+ktdW+mheyrl Dr04588.1 109 KRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 139 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MNPVNGQITV PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIRDVDLNKL EPWDLKDKCR 60 IGSGPQNEYY FFSHKDKKYP TGTRTNRATA AGFWKATGRD KAIHLSNSKR IGMRKTLVFY 120 TGRAPHGQKT DWIMHEYRLD ETNSEVQEDG WVVCRVFKKK NNQRGIPPEQ ILEDHELVNV 180 RASSSAPVDE KHLYHQMQYE HSLIDNSMHL PQLLSSEQSA PPPFMPPSSL SSLDLECSQN 240 LMKLMTSNGE VLVPQERFNG SDWSILDKLL GNIPPTQLMH MGSSSSSTSS SSAPAHRFPL 300 QYLGCETDLM KFTKYIPMRG ERDPLVLGRV IGDVIDPFTR SVSLQVKFGS KDVTNGREFK 360 PSQVVNQPRV EIGGTDLTTF YTLVMVDPDA PSPSDPNLRE YLHWLVADIP GTTGTLFGQE 420 IVCYESPRPS LGIHRYAFIL FQQLGRQTVY APGWRQNFYT RDFAELYNLG APVAAVYFNC 480 QRESGSGGRR MYN

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MNPVNGQITV PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIRDVDLNKL EPWDLKDKCR  60
IGSGPQNEYY FFSHKDKKYP TGTRTNRATA AGFWKATGRD KAIHLSNSKR IGMRKTLVFY  120
TGRAPHGQKT DWIMHEYRLD ETNSEVQEDG WVVCRVFKKK NNQRGIPPEQ ILEDHELVNV  180
RASSSAPVDE KHLYHQMQYE HSLIDNSMHL PQLLSSEQSA PPPFMPPSSL SSLDLECSQN  240
LMKLMTSNGE VLVPQERFNG SDWSILDKLL GNIPPTQLMH MGSSSSSTSS SSAPAHRFPL  300
QYLGCETDLM KFTKYIPMRG ERDPLVLGRV IGDVIDPFTR SVSLQVKFGS KDVTNGREFK  360
PSQVVNQPRV EIGGTDLTTF YTLVMVDPDA PSPSDPNLRE YLHWLVADIP GTTGTLFGQE  420
IVCYESPRPS LGIHRYAFIL FQQLGRQTVY APGWRQNFYT RDFAELYNLG APVAAVYFNC  480
QRESGSGGRR MYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	9e-99	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr04588.1