PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04677.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 210aa    MW: 23708.4 Da    PI: 6.1148
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04677.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.4e-2177126255
        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +grW+AeIrd +     r  r +lg+f+tae+Aa+a++ a+ +++g
  Dr04677.1  77 KYRGVRQRP-WGRWAAEIRDpW-----RaVRKWLGTFDTAEDAARAYDLAAIQFRG 126
                8********.**********88.....77***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MIISSLVQVI CGDTSPAIII PEFFHLQPCL ICGIDGCLGC DLFSDATNTT SSCSNANAAT  60
DEQKQQKKKR REKKKNKYRG VRQRPWGRWA AEIRDPWRAV RKWLGTFDTA EDAARAYDLA  120
AIQFRGPRAK LNFPFPEQCX GNGVYDHTAS ASTSMSSCTC ASGATSEEVC QYQHQYIHQY  180
EQQKKQEDEM AVSFWDGLQD LVQLDETELF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16771KKKRR
26774KKKRREKK
36873KKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.11e-21ERF family protein