PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04679.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 206aa    MW: 22847.2 Da    PI: 9.7731
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04679.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.25.4e-1599135242
        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeA 42 
                +y+GVr+++ +g+WvAeIrd +     +  r +lg+f tae+A
  Dr04679.1  99 KYRGVRQRP-WGKWVAEIRDpW-----QaVRKWLGTFNTAEDA 135
                8********.**********88.....67**********9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MTAKSSQVMT SLYSQDQEQA IIISSLVHVI SGDTSPATTI PDLFQRQLCS TCGIGGCLGC  60
DLFPNTTTSA TSNTTSSKTR AATDDQKQQK KKRREKKNKY RGVRQRPWGK WVAEIRDPWQ  120
AVRKWLGTFN TAEDAVGLMT WLLFSFVVPE LSSIFLFLIS KMEMGFMITL QVLVVLLVKN  180
SHNISIQYEQ QKKQGGGGGD GGEFLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19094KKKRR
29097KKKRREKK
39196KKRREK
49299KRREKKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-17ERF family protein