PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04804.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NF-YC
Protein Properties Length: 126aa    MW: 14317.4 Da    PI: 4.7823
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04804.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC134.92.4e-422610225101
      NF-YC  25 rikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101
                 ikki+kadedv+mi+aeaPv++++ace+filelt rsw haeenkrrtl+k+diaaa+trtd+fdflvdivpr+e 
  Dr04804.1  26 GIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRSWAHAEENKRRTLQKNDIAAAITRTDVFDFLVDIVPREEG 102
                59************************************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MCMFYLLLMQ VEDHGPARAW DTSSDGIKKI MKADEDVRMI AAEAPVVFAR ACEMFILELT  60
HRSWAHAEEN KRRTLQKNDI AAAITRTDVF DFLVDIVPRE EGKEDVVPRA LGAPAGDPLS  120
YYYVQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17278RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.18e-49NF-YC family protein