PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05010.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 235aa    MW: 26812.1 Da    PI: 9.7794
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1059.6e-3327554128
        NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                +e+ewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++  g+ vg+kktLvfykgrapkgekt+Wvmheyr 
  Dr05010.1   2 GEREWYFFSMRDRKYPTGLRTNRATNAGYWKTTGKDKEIFH-CGAMVGMKKTLVFYKGRAPKGEKTNWVMHEYRH 75 
                578**************************************.99*****************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MGEREWYFFS MRDRKYPTGL RTNRATNAGY WKTTGKDKEI FHCGAMVGMK KTLVFYKGRA  60
PKGEKTNWVM HEYRHQTKFP YRPTKEEWVV CRVFKKNSNG KRPTSLTESP TNTNSLSDVG  120
ELDVSIFNNL VNNSSSFEAV QTNENNKHKY GNKEMDLSMC MNWFGRDALS SSPFPWSSNL  180
LGSNFSSSPT VMKPWPSIAT LSSFMAQDHA TSSKASDCAA QQAFDHQDSI WRGGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.15e-58NAC family protein