PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05019.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 231aa MW: 26575.9 Da PI: 5.5837

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05019.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26	1.7e-08	128	175	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + k + a +L + ++Y++sLq Dr05019.1 128 SHSLAERVRREKINERMRCLQDLVPGC----YKAMGMAVMLDEIINYVQSLQ 175 8*************************8....355999999999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MLFHSLTFEH IFMSTDSSFS FIDMDSTMEL MHHFDEIKDN VSDYSLPPVP FIDNLSVLFP 60 TENEEDKKRK AEALPETFSG NSSAITDDKH KERNCSVKKK RRRSNSKDDE KPKEVVHVRA 120 KRGQATDSHS LAERVRREKI NERMRCLQDL VPGCYKAMGM AVMLDEIINY VQSLQNQVEF 180 LSMKLSAASS FYDFNLDIEA MATQQVNDAY EAQEGHGGCT TSFPFIQHWP F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	103	KKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18400.1	1e-54	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr05019.1