PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05059.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 243aa MW: 27497.1 Da PI: 5.6464

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05059.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.7	9.9e-32	128	183	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r+ W+peLH++F++a+eqLGGs++AtPk+i+e+mkv+gLt+++vkSHLQkYRl+ Dr05059.1 128 KARRSWSPELHRKFLHALEQLGGSHVATPKQIREIMKVDGLTNDEVKSHLQKYRLH 183 689***************************************************97 PP
2	Myb_DNA-binding	42	2.2e-13	130	181	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r +W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ Dr05059.1 130 RRSWSPELHRKFLHALEQLGGShvaTPKQIREIMKvDGLTNDEVKSHLQKYR 181 678***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MVPLEEEKTK STMEYIEALE EERRKMEVFH RELPLCVQLV TQAIESIKNG EDCPVKSGEV 60 LPTPVLEEFI PLKPSLSSFD GEDRQRCHET TMEEKPDWLR SVQLWSQEPE PELELEKKEG 120 GQSPTQRKAR RSWSPELHRK FLHALEQLGG SHVATPKQIR EIMKVDGLTN DEVKSHLQKY 180 RLHTKRSAPA VPISGNSSAQ TPHFMVVSGI WVQPIEFAST TLNGTTSSSS QMTTVSPADE 240 PKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13300.1	7e-56	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr05059.1