PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05125.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 241aa    MW: 26690 Da    PI: 7.0186
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05125.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83e-30110168259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+ dp v+++tY+ eHnh+
  Dr05125.1 110 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERSRGDPGVLVVTYTAEHNHP 168
                69*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MSSGDDDWGL DAVVRSCTTT TTTTTTSFPI KQPPSPPPRF PSPLPVSPPH QETSTILQYE  60
LQDLCNPFFS KLQPPPKPKT IISQTLPRSK RRKNQQKKVV CHVPADGLGS DIWAWRKYGQ  120
KPIKGSPYPR GYYRCSSSKG CMARKQVERS RGDPGVLVVT YTAEHNHPAP THRNSLAGST  180
RSKVSNMTGV APESQQTSPL SSPTTPLTVN MEEEEEEELV VEDMEVVGDD ELLFLGVDEE  240
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.15e-57WRKY family protein