PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05284.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 206aa    MW: 23205.9 Da    PI: 9.8336
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05284.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.62.1e-11105148447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      W+ +E+ l++ + + +G+g+W++I+r    +Rt+ q+ s+ qky
        Dr05284.1 105 WSRQEHMLFLYGLHAYGKGDWRSISRNCVVTRTPTQVASHAQKY 148
                      ***************************999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MVTENQNTSS QWTWEQNKAF EKALVSFIND KNWEKLAAEI PGKTIEDVRC HLNLLFKDIE  60
SIESGLVPFP NYISSPSSSS SSSSSSSDGA NTLKPKRERR KGKLWSRQEH MLFLYGLHAY  120
GKGDWRSISR NCVVTRTPTQ VASHAQKYFT RQNSVKKDRR RSSIHDITHV DGGDMLAYQG  180
TISSQTTTTD VPFAFVASSS PHFSLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-58MYB family protein