PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05302.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 240aa    MW: 26740.1 Da    PI: 6.0153
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05302.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.62.9e-051521891254
                HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                R +++ +++ +L++l+ +      +K + a++L  ++eYIksL
  Dr05302.1 152 RKEKLGDRITTLQQLVSPF-----GKTDTASVLLDTIEYIKSL 189
                77888999********998.....8*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MGERDMYESK WMAENQRIAS PSNITTVAQD LSSYEPVATA SSSSLLELDA LSMNWRREIP  60
RSNDHLANWF PSPNPMHALK QGQIKSELFL ISSKHQLSSQ TDEASSQSLE SIVNNQLLSS  120
NEAQSQKPSP ESSSIASQQK RTVSTISTLK VRKEKLGDRI TTLQQLVSPF GKTDTASVLL  180
DTIEYIKSLH DQVNVSTVCS IFKDGWYIFL LNSLLLHSAA PPFSLWNTYC LTALTVLDPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05170.11e-19bHLH family protein