PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05314.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 433aa MW: 48283.4 Da PI: 6.2011

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05314.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.9	4.3e-09	268	317	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++ rE+ RRd++N++f eL + l + + +K +K +iL A + +L Dr05314.1 268 SKSKACREKLRRDKLNDRFLELSSALEPG---RPPKSDKTSILSDAACVLEQL 317 578899********************8...89**********9998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MELDRAEDYL IDDSGMGSDG ELHRAIEILC ELPPTSGVQM GDVYIGDGAI QQMDSSNRLD 60 IGIIYGGPCN LEQTNSGNMG LAYRDACAVE HTNAGTRIYY SSDQQYPPLD AECQGPDISL 120 TNNHPRRRII DNPLLKLLFI SFENGRISDC RSCWSSRSTV NMGKNTNAIK NGLESKPSWN 180 IIGAIKHHIR VGDTAVTDIR KNSTESVQVW HGRSGRRRSP EKEWRGSTPL QPSYSDTIVD 240 TMLVHGDNVS LEEHNTRKRA MDEDCSRSKS KACREKLRRD KLNDRFLELS SALEPGRPPK 300 SDKTSILSDA ACVLEQLKAE AQELKTANEK LQETINDLKA EKNELRDEKT RLKEEKEKLE 360 QQVKSMSMPP VGYMPHPVVI HPYAMAPGFA PGAPSPANKP GSFAAFPSMP MWQWMPSAFV 420 DTTQDAKLWP PNA

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MELDRAEDYL IDDSGMGSDG ELHRAIEILC ELPPTSGVQM GDVYIGDGAI QQMDSSNRLD  60
IGIIYGGPCN LEQTNSGNMG LAYRDACAVE HTNAGTRIYY SSDQQYPPLD AECQGPDISL  120
TNNHPRRRII DNPLLKLLFI SFENGRISDC RSCWSSRSTV NMGKNTNAIK NGLESKPSWN  180
IIGAIKHHIR VGDTAVTDIR KNSTESVQVW HGRSGRRRSP EKEWRGSTPL QPSYSDTIVD  240
TMLVHGDNVS LEEHNTRKRA MDEDCSRSKS KACREKLRRD KLNDRFLELS SALEPGRPPK  300
SDKTSILSDA ACVLEQLKAE AQELKTANEK LQETINDLKA EKNELRDEKT RLKEEKEKLE  360
QQVKSMSMPP VGYMPHPVVI HPYAMAPGFA PGAPSPANKP GSFAAFPSMP MWQWMPSAFV  420
DTTQDAKLWP PNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14410.2	1e-40	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr05314.1