PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05385.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WOX

Protein Properties

Length: 260aa MW: 29597.1 Da PI: 6.4242

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05385.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.8	2.8e-21	88	148	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F n +ps++++++++++l +++e++V++WFqNrRa+ k+ Dr05385.1 88 RQRWTPTPMQLQILENIFDHgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 148 89***************99************************************97 PP
2	Wus_type_Homeobox	103.9	1.1e-33	87	150	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq Dr05385.1 87 ARQRWTPTPMQLQILENIFDHGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 150 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MNREAEEERR GGGDGDVVGD GVMYVKVMTD EQMEVLRKQI SAYATICEQL VEMHKAMTAQ 60 QDSLAGMKLG NLYCDPLMTT GCHRITARQR WTPTPMQLQI LENIFDHGNG TPSKQKIKDI 120 TAELSQHGQI SETNVYNWFQ NRRARSKRKQ TASLPNNSES EVEAEVESPD EKKSKSERIL 180 SHDNLHQVIP ASSFHTKEQD HSRTQNIFPS NDNVKPSPTF NQIPFYGGSL SNQRMDHLMG 240 KEYPGNFGFF QPGERYDMLQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	142	150	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	6e-70	WOX family protein

Link Out ? help Back to Top
Ensembl	Dr05385.1