PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05425.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB_related

Protein Properties

Length: 223aa MW: 24762.5 Da PI: 4.9056

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05425.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.5	4.3e-15	157	202	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++W++eE++ ++++ +++G+g+W++I+r k+Rt+ q+ s+ qk+ Dr05425.1 157 NPWSEEEHKAFLKGLAEFGKGDWRSISRFAVKTRTPSQVASHAQKF 202 58******************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MLPGDELQDV ITEPKFSDNV TVTAAPTLTS FSSSIWSSQE NKMFEVELAY NPRETVNRWE 60 KIAAKLPGRS VQEVIEHYEE LTLDLAAIEA GAVQFPACQD VDDVNDDDDD YDGGGGVNVN 120 EVNQGFREPL ASGLMSMNCS NPSSSRTKVE NKKQRANPWS EEEHKAFLKG LAEFGKGDWR 180 SISRFAVKTR TPSQVASHAQ KFFIRSSGGK KSKRKSIHDI TEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	8e-33	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr05425.1