PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05625.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 297aa MW: 33673.1 Da PI: 8.1928

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05625.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.6	8.4e-52	8	132	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhPtdeelv++yL++++++ ++++ +i+e+d+yk++PwdLp ++ +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ s + v Dr05625.1 8 LPPGFRFHPTDEELVMHYLCRRCASMPISV-PIIAEIDLYKYDPWDLPGMAVYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGS--PRPV 104 79**************************.88***********6555679**********************************99..779 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy+g+apkgek++W+mheyrl Dr05625.1 105 GIKKALVFYTGKAPKGEKSNWIMHEYRL 132 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MNAGDLQLPP GFRFHPTDEE LVMHYLCRRC ASMPISVPII AEIDLYKYDP WDLPGMAVYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGSGYWK ATGADKPIGS PRPVGIKKAL VFYTGKAPKG 120 EKSNWIMHEY RLADVDRSVR RKNSLRLDDW VLCRIYNKKG VGGKQGNLDR KPTGPKTVLQ 180 PEMTGSVEQK PIIAPHVLGG TTTVPYVPQP VSDLLYLDPS ESLPRLHADS SCSEHVLSPE 240 FTCEREVESQ PSWRNEWEKA LXVPLNHGDA TVNGFPNFEP AFKDPLQDIF MYFQKPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-130	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr05625.1