PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05655.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GATA
Protein Properties Length: 238aa    MW: 26023.3 Da    PI: 7.4381
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05655.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA633.6e-20102136135
       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                C+nC tt+TplWR+gp g+k+LCnaCG++y+k+++
  Dr05655.1 102 CANCDTTSTPLWRNGPKGPKSLCNACGIRYKKEER 136
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MPQHYSEGTS FSILFPMTTN SHPKYYYSSS SSLSSMDTSS SSSSVDCTLS LGTPSTRQSD  60
HANANSNGTS TTSKLPINGY WDFLTNSSKP ASRDHLLHAR RCANCDTTST PLWRNGPKGP  120
KSLCNACGIR YKKEERRAIV SSTSSTSSCS SVSQSGLNEK VMSYGYQQAV QQSPWGCYGA  180
SGTGVPISMF SGNNDDDDEE DDQGYLSWRL NMVQPSSSSS SQFHHVRDNR PCSLFQYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18380.12e-31GATA family protein