PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05664.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 86aa    MW: 9467.39 Da    PI: 9.4883
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05664.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding262.1e-08957247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                      +WT+   +++ +a + + ++   +W  +ar +g g++++++ +++  +
        Dr05664.1  9 SSWTAKQNKIFENALAHYDKDtpdRWQNVARAVGSGKSPEDVELHYKRL 57
                     58********************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MASRSPSTSS WTAKQNKIFE NALAHYDKDT PDRWQNVARA VGSGKSPEDV ELHYKRLVED  60
VNNIDSGNVP YPNYRASGGK AGTVKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-32MYB_related family protein