PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05810.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ZF-HD
Protein Properties Length: 131aa    MW: 14517.2 Da    PI: 9.3892
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1049.9e-3361118260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  + vrY+eC+kNhAa++Gg+avDGC+Efm+s geegt++alkCaAC+CHR+FH+reve e
    Dr05810.1  61 KVVRYRECRKNHAANIGGYAVDGCREFMAS-GEEGTVEALKCAACNCHRSFHKREVERE 118
                  579**************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MPTSSSSSTT HTSTQLSLKP KSGDRSKGTP TTPTTILNTR NMKPQQEPKK YSNGSLAKKE  60
KVVRYRECRK NHAANIGGYA VDGCREFMAS GEEGTVEALK CAACNCHRSF HKREVERELE  120
CDCSSNSNSW R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.19e-33ZF-HD family protein