PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05822.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 260aa MW: 30170.9 Da PI: 8.5351

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05822.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174	4.4e-54	10	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppG+rFhPtdeel+++yL +k+ + +l+ ++i++v+ +k+ePwdLp k +v++ +e+e yfF++rd+ky+tg r+nrat+sgyWkatgkd+e+++ + Dr05822.1 10 LPPGYRFHPTDEELITHYLSNKAMNPSLTS-RAIPDVNFNKCEPWDLPsKaMVEEkeKETEFYFFCQRDRKYPTGMRTNRATESGYWKATGKDREIFKDG 108 79***********************999.89**********954433332144588********************************99 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + lvg+kktLvfy grapkg+kt+W+mheyrl Dr05822.1 109 KLLVGMKKTLVFYLGRAPKGHKTNWIMHEYRL 140 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MADNPTFKNL PPGYRFHPTD EELITHYLSN KAMNPSLTSR AIPDVNFNKC EPWDLPSKAM 60 VEEKEKETEF YFFCQRDRKY PTGMRTNRAT ESGYWKATGK DREIFKDGKL LVGMKKTLVF 120 YLGRAPKGHK TNWIMHEYRL QQSKCAWVVC RVYKKKKESE KSVNSSEKSN TEEEEQSLQQ 180 EKIHANQTSC SLKNFGYLHQ NELQQSPVQS IVTTALQDGV VNPEGNTRIS SANSGYNNLQ 240 PLENYLHCSY EDLKNIYSWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	6e-70	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr05822.1