PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05823.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 242aa    MW: 26581 Da    PI: 4.8751
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05823.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.11.3e-17664150
        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........k 50
               lppGfrF Ptdeel+v+yL k++++ +l++ ++i+evdiyk++PwdLp           +
  Dr05823.1  6 LPPGFRFFPTDEELIVHYLSKRASSLPLPV-SIIAEVDIYKFDPWDLPGnpsnnltptnS 64
               79****************************.89**************9435555554331 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MTSPSLPPGF RFFPTDEELI VHYLSKRASS LPLPVSIIAE VDIYKFDPWD LPGNPSNNLT  60
PTNSIHKTLS LSTYIFSHDL LDQPKPFSAI ENGISSPQET GNTPTVSGQT ELPSPATGKP  120
PLDDWVLCRI YKKNTVNHSI PLVAPQLGLG LDKDQEETST VEDFYSSGLV NVDKSFSLSD  180
LLINDAEYSN LSQLLSMEHD IPGPKRIKPA HGFLQDGAGF LPSSSKKINS SCMPNLFHFN  240
QL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-27NAC family protein