PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05824.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 287aa MW: 33184.1 Da PI: 5.7172

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05824.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.3	8.7e-51	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 lppGfrFhPtd+elvv+yL++kv+ + l++ +i+evd+yk++Pw+Lp+k+ +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v + + Dr05824.1 13 LPPGFRFHPTDDELVVHYLCRKVAYQCLPV-PIIAEVDLYKYDPWELPEKALFGQREWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVSPPgSVRP 111 79**************************.88***********8878899*********************************99855567 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy+g+apkg ktdW+mheyrl Dr05824.1 112 LGIKKALVFYSGKAPKGIKTDWIMHEYRL 140 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MRRTRDAEAE LNLPPGFRFH PTDDELVVHY LCRKVAYQCL PVPIIAEVDL YKYDPWELPE 60 KALFGQREWY FFTPRDRKYP NGSRPNRAAG RGYWKATGAD KPVSPPGSVR PLGIKKALVF 120 YSGKAPKGIK TDWIMHEYRL ADKNRATNNK KGSLRLDDWV LCRLYNKKNS WEKIKQQKEE 180 VSFGETMSSF EANDSLESDV EHDSFQEFDE LVQSEAGVYH PGKSSDGLQQ QQQQQQQQFG 240 TVEQRMKEES DWFTDLNLDD LQGDAIGSLP SVPSLDLSNH EYYFPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	3e-91	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr05824.1