PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05873.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 255aa    MW: 29254.2 Da    PI: 4.2518
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05873.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY651.2e-2056113359
                -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SS.STTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversae.dpkvveitYegeHnhe 59 
                Dgy+W+KYG K++k+sef r YY+C  ++C+++kkv+++++ +p+ ++++Y  +H+++
  Dr05873.1  56 DGYQWQKYGEKDIKNSEFRRTYYKCINEECKARKKVQQQDKyEPSNFIVIYDMQHTCN 113
                9***********************************98765499************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSSLSQSISA LDSNASDQLA SKKMKRIHHE YTTSTVKRRR SVNDSTAVVT TTPFCDGYQW  60
QKYGEKDIKN SEFRRTYYKC INEECKARKK VQQQDKYEPS NFIVIYDMQH TCNNVVQETN  120
QNLFTIDSSP STSTLNFGPI LESSYLMMNN QQEQTLSATS DQLQIKKTEN HDNISVAKAV  180
QGDESIVDNM EIFSPLTSLL DLNENENENI WELFNLTDDE FASSPLDLNE NENIWELFNL  240
MDDELASSPD DGFPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.21e-14WRKY family protein