PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05925.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 257aa MW: 29427.9 Da PI: 7.7958

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05925.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.6	5.6e-10	183	218	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ Dr05925.1 183 YKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 218 5679*****************************885 PP
2	ELK	40.2	6.9e-14	138	159	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+LlrKYsgyL+sL+qE+s Dr05925.1 138 ELKHHLLRKYSGYLSSLRQELS 159 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MCPPSSSSTP AQPLMNMHPH HPHHHHHHHH HNTNPNSIMK PEASSSAQQD GTTRDNEIKA 60 KIISHPQYSA LLSAYLDCQK ASLSCTFNPF IFTTFYFNLS SSKLYDKCDG VGSSDDDQDG 120 SGGEAEPPEI DPRAEEKELK HHLLRKYSGY LSSLRQELSK KKKKGKLPKE ARQKLLSWWE 180 LHYKWPYPSE TEKVALAEST GLDQKQINNW FINQRKRHWK PSEDMQFVVM DGYHPQNAAA 240 FYMEGQFMGD GPYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	9e-67	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr05925.1