PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr06028.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

C2H2

Protein Properties

Length: 229aa MW: 24188.3 Da PI: 8.5818

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr06028.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	85	107	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k Fs+ L H +H Dr06028.1 85 YQCSVCDKAFSSYQALGGHKASH 107 9***********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MAVDAIGTTP TPTPPPAQLT TTSDAGESCW AKRKRSKRHH RYFDHPPTEE EYLALCLVML 60 ARGGSDHRPV FRSPPPLFPA TQNSYQCSVC DKAFSSYQAL GGHKASHRKP MDESTAATAV 120 QVAPASSATS GSVSGGVRVH RCGICSKVFP SGQALGGHKR CHYDGTPGSA SGSGAAVSET 180 TTTTTSSVFR GFDLNLPAVP ELARCLSVVG EEEEVQSPLP LKKPRLLLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	2e-41	C2H2 family protein

Link Out ? help Back to Top
Ensembl	Dr06028.1