PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr06176.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family Nin-like
Protein Properties Length: 323aa    MW: 35418.2 Da    PI: 9.078
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr06176.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK55.21.3e-173482348
     RWP-RK  3 keisledlskyFslpikdAAkeLg...vclTvLKriCRqyGIkRWPhRk 48
               ++i l+++sk ++lpi++AA+ Lg   ++  vLKriCR++G+ RWP+Rk
  Dr06176.1 34 SRIPLDEISKLYHLPIAEAASILGdspISFCVLKRICREHGVVRWPYRK 82
               68999*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MTSTSAPEGP LHQQQQQQQQ LVGSVAAPPR ASNSRIPLDE ISKLYHLPIA EAASILGDSP  60
ISFCVLKRIC REHGVVRWPY RKFIAGKTAD DIKKDSGGEG ANEFVDPSNM AKQKIDVSKM  120
LLPTSVSSSL TFGSQVPNKT AGLTQDPSKL QRGIPMVGST AQPQVARFSQ DGWANTFQSS  180
TRHIPSYMDE FKFGFPVNGL STVTVKWWGS GBKESSEKSS KGVPMGENXE KQEACDSSNE  240
TSSLAKIDGK EDNDVECAEI KTEPKPSTLL HSTRKNAVEY GHKTLKLGIS KGYETYKLTK  300
KQKSVLLQVF KTSLPDQWKE SFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.17e-09Nin-like family protein