PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr06179.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 246aa    MW: 27739.6 Da    PI: 6.7894
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr06179.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.81.2e-19209246238
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38 
                 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v
  Dr06179.1 209 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQV 246
                7***************************99*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MNMNSINGHQ EMDFFSEDKK NNKGMRNZEL DLKTTPWLGI KKEDLTMSTG FQLMNIKMND  60
HSTVDNEDRS HELEAMQAEL GRMDEENKRL RVLLSQVTNN YNTLQAHLLA VMKQRDQSGH  120
EVVQRQFIDL GPTVNTVVVD TDEPSHSSTA GGSQEISTSP SNNIEVGSLG TEEKEKLSPN  180
KNNDQASQEA TMRKARVSVR ARSEAPMITD GCQWRKYGQK MAKGNPCPRA YYRCTMATGC  240
PVRKQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-57WRKY family protein