PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr06191.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 324aa    MW: 35201 Da    PI: 7.0465
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr06191.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.90.000412072451255
                HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  Dr06191.1 207 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 245
                6677889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MNRGVFHSSS VQQMMGGNNP NWWSSISNMK QTAGDETSLL YPFPSSSPLF HHFSHHQPSS  60
LFLPPMFPFQ ENQDLPESWS QLLLGGLVGE DADQRCVSLN PFQDQVVYSS ASSTHIGGGD  120
VKQESSESGY VYGPGSSTCD EIHAGRSCVT TSFSSSMLDF SNSNKAEKRQ AQAPDHSSEC  180
NSTANGAAFK KARVQASSSP QSTFKVRKEK LGDRITALHQ LVSPFGKTDT ASVLLEAIGY  240
IRFLQGQIEA LSSPYLTTSS GSRRQSLLND NNMKKRGPKD QAVNDEAKDL RSRGLCLVPV  300
SCTLHVGSEN GADYWAPTFG AGFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.16e-59bHLH family protein