PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr06331.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 337aa    MW: 37285.1 Da    PI: 8.4266
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr06331.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.58.7e-56181461129
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                lppGfrFhPtdeel+++yL kkv ++ ++  ++i+e+d++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ +g+l
  Dr06331.1  18 LPPGFRFHPTDEELITYYLLKKVLDSGFTG-RAIAEIDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATDAGYWKATGKDREIYSTkTGSL 116
                79*************************999.89***************99999****************************************9867889 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129
                vg+kktLvfykgrapkgek++Wvmheyrle
  Dr06331.1 117 VGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 146
                ****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MEFYGMHGLH GSDAEAQLPP GFRFHPTDEE LITYYLLKKV LDSGFTGRAI AEIDLNKCEP  60
WELPEKAKMG EKEWYFFSLR DRKYPTGLRT NRATDAGYWK ATGKDREIYS TKTGSLVGMK  120
KTLVFYKGRA PKGEKSNWVM HEYRLEGKFA YHFLSRSSKD EWVVSRVFQK IGGGKKARIS  180
VATGFSYIDS SSSAIAISGS PSSTSLPPLL DSPYATGNAA ADRESCSYDS SDRNNVPCFS  240
TTFAATTFQA PPPAPPPPPQ PAIYRRGNGN ASLIPSSMQQ GNIQLPFFLA PQVTAAMVCD  300
NADQHQQQGG LGWVEIERKV DIGRSLGGTE LDCLWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.11e-102NAC family protein