PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr06416.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 194aa    MW: 21439.9 Da    PI: 7.7836
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr06416.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.5e-184491253
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++ 
  Dr06416.1 44 LYRGVRMRT-WGKWVSEIREPKK---KSRIWLGTFPTPEMAARAHDVAALSV 91
               69****998.**********854...6*********************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MINRSDSETS VQSSTTTSSS SPSSPPPESS KRPKRVRDSS RHPLYRGVRM RTWGKWVSEI  60
REPKKKSRIW LGTFPTPEMA ARAHDVAALS VKGDSAILNF PELAASLPRP ATLAPRDVQX  120
AAAKAAAMEP VTEPAPDELG EIVELPRLGD EWLDSAEFVF YDDSWAVHKS LFTKVDDLKS  180
LNSNATLSRQ TFID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.19e-58ERF family protein