PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr06625.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 254aa    MW: 28931.9 Da    PI: 4.8426
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr06625.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.2e-163878547
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +  E++l +d+++qlG++ W++Ia+ ++ gRt++++k++w+++
        Dr06625.1 38 SDSEEKLVIDLHAQLGNR-WSKIASQLP-GRTDNEIKNHWNTH 78
                     788***************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDNRGRQEVN KLHPHQWPLL LESCTKACRP DLKRGLLSDS EEKLVIDLHA QLGNRWSKIA  60
SQLPGRTDNE IKNHWNTHIK KKLRKMGIDP MTHKPISNTI SSSTHDHDQV PQEQAQHERQ  120
ASSSPEANVQ KSKEKCSQCS KSITEDNDTN YNEDRISDEQ LCDQSASCFF STDDVPMIEA  180
HEIIVNPKGS SCSTPSSSYG GMVEENQFQD FDWPETTSFW GVDDFTGLDF NCGDPFNLIQ  240
RAVLDQESWM FEAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.14e-41MYB family protein